A catalog of genetic loci associated with kidney function from analyses of a million individuals.

TitreA catalog of genetic loci associated with kidney function from analyses of a million individuals.
Publication TypeJournal Article
Year of Publication2019
AuthorsWuttke, M, Li, Y, Li, M, Sieber, KB, Feitosa, MF, Gorski, M, Tin, A, Wang, L, Chu, AY, Hoppmann, A, Kirsten, H, Giri, A, Chai, J-F, Sveinbjornsson, G, Tayo, BO, Nutile, T, Fuchsberger, C, Marten, J, Cocca, M, Ghasemi, S, Xu, Y, Horn, K, Noce, D, van der Most, PJ, Sedaghat, S, Yu, Z, Akiyama, M, Afaq, S, Ahluwalia, TS, Almgren, P, Amin, N, Arnlöv, J, Bakker, SJL, Bansal, N, Baptista, D, Bergmann, S, Biggs, ML, Biino, G, Boehnke, M, Boerwinkle, E, Boissel, M, Bottinger, EP, Boutin, TS, Brenner, H, Brumat, M, Burkhardt, R, Butterworth, AS, Campana, E, Campbell, A, Campbell, H, Canouil, M, Carroll, RJ, Catamo, E, Chambers, JC, Chee, M-L, Chee, M-L, Chen, X, Cheng, C-Y, Cheng, Y, Christensen, K, Cifkova, R, Ciullo, M, Concas, MPina, Cook, JP, Coresh, J, Corre, T, Sala, CFelicita, Cusi, D, Danesh, J, E Daw, W, de Borst, MH, De Grandi, A, de Mutsert, R, de Vries, APJ, Degenhardt, F, Delgado, G, Demirkan, A, Di Angelantonio, E, Dittrich, K, Divers, J, Dorajoo, R, Eckardt, K-U, Ehret, G, Elliott, P, Endlich, K, Evans, MK, Felix, JF, Foo, VHui Xian, Franco, OH, Franke, A, Freedman, BI, Freitag-Wolf, S, Friedlander, Y, Froguel, P, Gansevoort, RT, Gao, H, Gasparini, P, J Gaziano, M, Giedraitis, V, Gieger, C, Girotto, G, Giulianini, F, Gögele, M, Gordon, SD, Gudbjartsson, DF, Gudnason, V, Haller, T, Hamet, P, Harris, TB, Hartman, CA, Hayward, C, Hellwege, JN, Heng, C-K, Hicks, AA, Hofer, E, Huang, W, Hutri-Kähönen, N, Hwang, S-J, M Ikram, A, Indridason, OS, Ingelsson, E, Ising, M, Jaddoe, VWV, Jakobsdottir, J, Jonas, JB, Joshi, PK, Josyula, NShilpa, Jung, B, Kahonen, M, Kamatani, Y, Kammerer, CM, Kanai, M, Kastarinen, M, Kerr, SM, Khor, C-C, Kiess, W, Kleber, ME, Koenig, W, Kooner, JS, Körner, A, Kovacs, P, Kraja, AT, Krajcoviechova, A, Kramer, H, Krämer, BK, Kronenberg, F, Kubo, M, Kühnel, B, Kuokkanen, M, Kuusisto, J, La Bianca, M, Laakso, M, Lange, LA, Langefeld, CD, Lee, JJen-Mai, Lehne, B, Lehtimaki, T, Lieb, W, Lim, S-C, Lind, L, Lindgren, CM, Liu, J, Liu, J, Loeffler, M, Loos, RJF, Lucae, S, Lukas, MAnn, Lyytikainen, L-P, Mägi, R, Magnusson, PKE, Mahajan, A, Martin, NG, Martins, J, März, W, Mascalzoni, D, Matsuda, K, Meisinger, C, Meitinger, T, Melander, O, Metspalu, A, Mikaelsdottir, EK, Milaneschi, Y, Miliku, K, Mishra, PP, Mohlke, KL, Mononen, N, Montgomery, GW, Mook-Kanamori, DO, Mychaleckyj, JC, Nadkarni, GN, Nalls, MA, Nauck, M, Nikus, K, Ning, B, Nolte, IM, Noordam, R, O'Connell, J, O'Donoghue, ML, Olafsson, I, Oldehinkel, AJ, Orho-Melander, M, Ouwehand, WH, Padmanabhan, S, Palmer, ND, Palsson, R, Penninx, BWJH, Perls, T, Perola, M, Pirastu, M, Pirastu, N, Pistis, G, Podgornaia, AI, Polasek, O, Ponte, B, Porteous, DJ, Poulain, T, Pramstaller, PP, Preuss, MH, Prins, BP, Province, MA, Rabelink, TJ, Raffield, LM, Raitakari, OT, Reilly, DF, Rettig, R, Rheinberger, M, Rice, KM, Ridker, PM, Rivadeneira, F, Rizzi, F, Roberts, DJ, Robino, A, Rossing, P, Rudan, I, Rueedi, R, Ruggiero, D, Ryan, KA, Saba, Y, Sabanayagam, C, Salomaa, V, Salvi, E, Saum, K-U, Schmidt, H, Schmidt, R, Schöttker, B, Schulz, C-A, Schupf, N, Shaffer, CM, Shi, Y, Smith, AV, Smith, BH, Soranzo, N, Spracklen, CN, Strauch, K, Stringham, HM, Stumvoll, M, Svensson, PO, Szymczak, S, Tai, E-S, Tajuddin, SM, Tan, NYQ, Taylor, KD, Teren, A, Tham, Y-C, Thiery, J, Thio, CHL, Thomsen, H, Thorleifsson, G, Toniolo, D, Tonjes, A, Tremblay, J, Tzoulaki, I, Uitterlinden, AG, Vaccargiu, S, van Dam, RM, van der Harst, P, van Duijn, CM, Edward, DRVelez, Verweij, N, Vogelezang, S, Völker, U, Vollenweider, P, Waeber, G, Waldenberger, M, Wallentin, L, Wang, YXing, Wang, C, Waterworth, DM, Bin Wei, W, White, H, Whitfield, JB, Wild, SH, Wilson, JF, Wojczynski, MK, Wong, C, Wong, T-Y, Xu, L, Yang, Q, Yasuda, M, Yerges-Armstrong, LM, Zhang, W, Zonderman, AB, Rotter, JI, Bochud, M, Psaty, BM, Vitart, V, Wilson, JG, Dehghan, A, Parsa, A, Chasman, DI, Ho, K, Morris, AP, Devuyst, O, Akilesh, S, Pendergrass, SA, Sim, X, Böger, CA, Okada, Y, Edwards, TL, Snieder, H, Stefansson, K, Hung, AM, Heid, IM, Scholz, M, Teumer, A, Köttgen, A, Pattaro, C
Corporate AuthorsLifeLines Cohort Study, V. A. Million Veteran Program
JournalNature Genetics
Volume51
Issue6
Pagination957-972
Date Published06/2019
DOI10.1038/s41588-019-0407-x
ISSN1546-1718
Mots-clésChromosome Mapping, Chronic/genetics, Chronic/physiopathology, Chronic/urine, European Continental Ancestry Group, Genetic Association Studies/methods, Genetic Predisposition to Disease, Genome-Wide Association Study, Glomerular Filtration Rate, Heritable, Humans, Inheritance Patterns, Kidney Function Tests, Phenotype, polymorphism, Quantitative Trait, Quantitative Trait Loci, Renal Insufficiency, Single Nucleotide, Uromodulin/urine
Abstract

Chronic kidney disease (CKD) is responsible for a public health burden with multi-systemic complications. Through trans-ancestry meta-analysis of genome-wide association studies of estimated glomerular filtration rate (eGFR) and independent replication (n = 1,046,070), we identified 264 associated loci (166 new). Of these, 147 were likely to be relevant for kidney function on the basis of associations with the alternative kidney function marker blood urea nitrogen (n = 416,178). Pathway and enrichment analyses, including mouse models with renal phenotypes, support the kidney as the main target organ. A genetic risk score for lower eGFR was associated with clinically diagnosed CKD in 452,264 independent individuals. Colocalization analyses of associations with eGFR among 783,978 European-ancestry individuals and gene expression across 46 human tissues, including tubulo-interstitial and glomerular kidney compartments, identified 17 genes differentially expressed in kidney. Fine-mapping highlighted missense driver variants in 11 genes and kidney-specific regulatory variants. These results provide a comprehensive priority list of molecular targets for translational research.

Alternate URL

https://www.ncbi.nlm.nih.gov/pubmed/31152163?dopt=Abstract

WOS ID (UT)

000469996900008

Alternate JournalNat. Genet.
Citation Key / SERVAL ID9592
Peer reviewRefereed
PubMed ID31152163

                         

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